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[codex] Add Andes virus example data#20

Merged
theosanderson merged 3 commits intomainfrom
andes-virus-example-data
May 9, 2026
Merged

[codex] Add Andes virus example data#20
theosanderson merged 3 commits intomainfrom
andes-virus-example-data

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Summary

Adds a small Andes virus example dataset for the Pathoplexus demo instance:

  • example_files/andes_virus_test_metadata.tsv with one segmented submission row
  • example_files/andes_virus_test_sequences.fasta with L, M, and S segment sequences
  • README update listing Andes virus among available example datasets

The three FASTA records use the Andes virus reference segment sequences from the existing agent-store assets for NC_003468.2, NC_003467.2, and NC_003466.1.

This PR was written by AI.

Validation

  • Confirmed the metadata header and data row both have 79 TSV fields.
  • Confirmed the FASTA contains exactly three records with lengths 6562, 3671, and 1871 bases.
  • Ran git diff --check.

@theosanderson theosanderson marked this pull request as ready for review May 9, 2026 17:10
@theosanderson theosanderson merged commit 6e6209c into main May 9, 2026
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2 participants